Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015953738.1_cds_XP_016492792.1_82969
CDS Infomation

[gene=LOC107812249] [db_xref=GeneID:107812249] [protein=probable 26S proteasome non-ATPase regulatory subunit 3] [protein_id=XP_016492792.1] [location=complement(join(35423..35935,36515..36754,37329..37439,37522..37576,37767..37903,37998..38135,38837..39027,39341..39422))] [gbkey=CDS]
Sequence

ATGACTCAAGACGTGGAGATGAAGGAGCAAGCAGCTCCTCCTTCCAATTCTCTTTCATCC
ACTGCCCCTTCCATCTTCCACCATTTGAAAGAGATAGCATCGTTGATTGAGACTGGGGCA
TATGCTCGTGAGGTTCGGAGGATTTCGAGAGCCGTGAGGCTGACTATGGCACTGAGGAAG
AAGCTAAAGGCTTCTTCACTATCTGCTTTCCTCAATTATGTTCTAGTGCCTGGATCTGAG
GTGTATTCCCGGCTATCTTCCTTCCTACCCAAGGAAGACGAGCAGGATATGGAAGTTGAT
ACTGCAACATCTGGAGCTCAGGCACCGATTAAGAATCCTTTGCCAGAGCTTGAGATCTAT
TGCTACTTGCTTGTATTGATATTTCTAATCGACCAGAAGAAATACAATGAGGCTAAGGCT
TGCTCCTCAGCAAGTATTGCTCGTCTGAAAACTGTCAACAGGAGGACTGTTGATGTACTA
GCTTCTAGGCTTTACTTCTACTACTCTCTGTGTTATGAACTTACTGGTGATCTTGCCGAA
ATTCGAGGTAATCTCCTTGCATTGCATCGGATTGCAACATTACGCCATGATGAGTTGGGT
CAGGAAACACTCCTTAATCTGCTGCTGCGGAATTATCTTCACTACAACTTGTACGATCAA
GCAGAGAAATTGAGGTCAAAGGCCCCCCGTTTTGAAGCTCATTCAAATCAGCAGTTCAGC
CGATACCTCTTTTACCTTGGAAAGATCAGGACAATCCAGTTGGAATACACTGATGCTAAA
GAATCTCTTCTTCAAGCTGCTCGTAAAGCTCCTCAGGCTGCTCTTGGTTTCCGAGTTCAA
TGCAATAAATGGGCTATTATTGTCCGGTTATTGCTTGGAGAGATTCCAGAAAGGACTGTT
TTTATGCAGAAAGGCATGGAGAAAGCATTAAGGCCATACTTTGAGCTGACAAATGCTGTT
CGCATAGGAGATCTGGAGTTATTTAGGAAAGTTGCTGAGAAGTTCTCCAGCACTTTTAGT
TCAGATGGAACTAACAATTTGATTGTGAGACTCCGGCATAATGTCATTAGGACTGGGCTA
CGAAACATCAGTATCTCATACTCTCGGATCTCGCTGGTTGATGTTGCAAAAAAGCTGAGG
TTGGATTCTCCAAACCCTGTTGCTGATGCTGAGAGTATCGTGTCCAAAGCAATTCGAGAT
GGTGCAATTGATGCGACGTTGGATCATGCGAATGGATGGATGGTATCGAAGGAGACTGGG
GACATCTACTCTACAAATGAGCCTCAAATTGCTTTTAACTCAAGAATTGCCTTCTGTCTG
AATATGCATAATGAGGCTGTGCGTGCTCTTCGATTTCCTCCAAATTCCCACAAGGAGAAA
GAAAGTGCTGAGAAGAGGAGAGAGAGACAACAGCAAGAACAAGAGCTTGCTAAGCACATA
GCTGAAGAGGATGATGATGATTTCTGA

Peptide Sequence

PEP ID

XP_016492792.1
PEP Infomation

PREDICTED: probable 26S proteasome non-ATPase regulatory subunit 3 [Nicotiana tabacum]
Sequence

MTQDVEMKEQAAPPSNSLSSTAPSIFHHLKEIASLIETGAYAREVRRISRAVRLTMALRK
KLKASSLSAFLNYVLVPGSEVYSRLSSFLPKEDEQDMEVDTATSGAQAPIKNPLPELEIY
CYLLVLIFLIDQKKYNEAKACSSASIARLKTVNRRTVDVLASRLYFYYSLCYELTGDLAE
IRGNLLALHRIATLRHDELGQETLLNLLLRNYLHYNLYDQAEKLRSKAPRFEAHSNQQFS
RYLFYLGKIRTIQLEYTDAKESLLQAARKAPQAALGFRVQCNKWAIIVRLLLGEIPERTV
FMQKGMEKALRPYFELTNAVRIGDLELFRKVAEKFSSTFSSDGTNNLIVRLRHNVIRTGL
RNISISYSRISLVDVAKKLRLDSPNPVADAESIVSKAIRDGAIDATLDHANGWMVSKETG
DIYSTNEPQIAFNSRIAFCLNMHNEAVRALRFPPNSHKEKESAEKRRERQQQEQELAKHI
AEEDDDDF

Transcript Sequence

Gene sequence data has not been registered.